C7H14O7S | MD Topology | NMR | X-Ray

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Molecule Information

Molecule Typeheteromolecule
Residue Name (RNME)3YT3
FormulaC7H14O7S
IUPAC InChI Key
YVMKAEOIVQUONB-CAHLUQPWSA-N
IUPAC InChI
InChI=1S/C7H16O7S/c1-5(14-4-3-13-2)6(8)7(9)15(10,11)12/h5,7,9-12H,3-4H2,1-2H3/t5-,7+/m0/s1
IUPAC Name
Common Name
Canonical SMILES (Daylight)
COCCO[C@H](C(=O)[C@@H](S(=O)(=O)O)O)C
Number of atoms29
Net Charge0
Forcefieldmultiple
Molecule ID152239
ChEMBL ID 2008255
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

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X-Ray - Docking Files

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NMR Parameters

1H NMR Spectrum

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Fragment-Based Charges

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Topology History

Processing Information

QM Processing Stage

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Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 2000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

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Data

Current Processing StateCompleted
Total Processing Time2 days, 12:43:18 (hh:mm:ss)

ATB Pipeline Setting

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Calculated Solvation Free Energy

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