Molecule Type | heteromolecule |
Residue Name (RNME) | FYZU |
Formula | C42H52N6O9S |
IUPAC InChI Key | TZEFYWMPTNSZAK-GMDWLGNCSA-N |
IUPAC InChI | InChI=1S/C42H54N6O9S/c1-23(2)36(49)46-40-44-31(22-58-40)30-19-34(28-16-17-33(55-4)24(3)35(28)43-30)56-27-18-32-37(50)47-42(39(52)53)20-25(42)12-8-6-5-7-9-15-29(38(51)48(32)21-27)45-41(54)57-26-13-10-11-14-26/h8,12,16-17,19,23-27,29,32H,5-7,9-11,13-15,18,20-22H2,1-4H3,(H,45,54)(H,46,49)(H,47,50)(H,52,53)/b12-8-/t24?,25-,27+,29-,32-,42+/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | COC1=CC=C2C(=[N]=C(C=C2O[C@@H]2C[C@@H]3N(C2)C(=O)[C@H](CCCCC/C=C\[C@@H]2[C@](NC3=O)(C2)C(=O)O)NC(=O)OC2CCCC2)C2=[N]=C(SC2)NC(=O)C(C)C)[C@H]1C |
Number of atoms | 110 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 1575488 |
Visibility | Public |
Molecule Tags |
Generating ...
Generating ...
Generating ...
No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.
Click table to toggle details.
Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:06:05 (hh:mm:ss) |
Access to this feature is currently restricted