Molecule Type | heteromolecule |
Residue Name (RNME) | SKIH |
Formula | C21H51N12 |
IUPAC InChI Key | IWMZTAZUEOPDHW-BGERDNNASA-N |
IUPAC InChI | InChI=1S/C21H53N12/c22-7-1-8-26-10-3-13-29-20(25)30-15-5-17-33-18-6-16-32-21(33)31-14-4-11-27-9-2-12-28-19(23)24/h20-21,26-32H,1-18,22-25H2/t20-,21?/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | NCCCNCCCN[C@@H](NCCCN1CCCN[C@@H]1NCCCNCCCNC(=[NH2])N)N |
Number of atoms | 84 |
Net Charge | 1 |
Forcefield | multiple |
Molecule ID | 23759 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 5:53:20 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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