Molecule Type | heteromolecule |
Residue Name (RNME) | N5LK |
Formula | C41H39N11O8 |
IUPAC InChI Key | FZKOZRRTBWERRM-YANNUVDLSA-N |
IUPAC InChI | InChI=1S/C41H43N11O8/c42-28-11-5-25(6-12-28)3-1-2-4-26-7-15-31(16-8-26)50(18-17-33(53)47-29-13-9-27(10-14-29)41(57)58)19-30-20-51(49-48-30)21-32-37(59-22-34(54)55)36(56)40(60-32)52-24-46-35-38(43)44-23-45-39(35)52/h1-16,23-24,32,36-37,40,49,56H,17-22,42-43H2,(H,47,53)(H,54,55)(H,57,58)/b3-1+,4-2+/t32-,36-,37-,40-/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | [O-]=C(CO[C@@H]1[C@@H](CN2NN=C(C2)CN(c2ccc(cc2)/C=C/C=C/c2ccc(cc2)N)CCC(=O)Nc2ccc(cc2)C(=[O-])O)O[C@H]([C@@H]1O)N1C=[N]=C2C1=[N]=[CH]=[N]=C2N)O |
Number of atoms | 99 |
Net Charge | -2 |
Forcefield | multiple |
Molecule ID | 302806 |
Visibility | Public |
Molecule Tags |
Generating ...
Generating ...
Generating ...
No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.
Click table to toggle details.
Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:23:04 (hh:mm:ss) |
Access to this feature is currently restricted
The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
Access to this feature is currently restricted