Molecule Type | heteromolecule |
Residue Name (RNME) | OYSM |
Formula | C27H30NO10 |
IUPAC InChI Key | WMXGYNDSSXLKDX-VGBVRHCVSA-N |
IUPAC InChI | InChI=1S/C27H30NO10/c1-10-22(30)14(28)7-17(37-10)38-16-9-27(35,11(2)29)8-13-19(16)26(34)21-20(24(13)32)23(31)12-5-4-6-15(36-3)18(12)25(21)33/h4-6,10,14,16-17,22,30,32,34-35H,7-9H2,1-3,28H3/t10-,14-,16-,17-,22+,27-/m0/s1 |
IUPAC Name | [(2S,3S,4S,6R)-6-[[(1S,3S)-3-acetyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-2,4-dihydro-1H-tetracen-1-yl]oxy]-3-hydroxy-2-methyloxan-4-yl]azanium |
Common Name | (1S,3S)-3-Acetyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydro-1-tetracenyl3-ammonio-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside |
Canonical SMILES (Daylight) | COc1cccc2c1C(=O)c1c(C2=O)c(O)c2c(c1O)[C@@H](O[C@H]1C[C@H]([NH3+])[C@@H]([C@@H](O1)C)O)C[C@](C2)(O)C(=O)C |
Number of atoms | 68 |
Net Charge | 1 |
Forcefield | multiple |
Molecule ID | 358464 |
ChemSpider ID | 5422473 |
Clinial Phase (ChEMBL) | 4 |
PDB hetId | DM1 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 34 days, 22:59:59 (hh:mm:ss) |
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