Molecule Type | sugar |
Residue Name (RNME) | E66B |
Formula | C30H52O25 |
IUPAC InChI Key | WQPZDLPZHVPGLR-WGFVFYIASA-N |
IUPAC InChI | InChI=1S/C30H52O25/c31-1-11-17(37)18(38)16(51-11)6-47-28(24(44)20(40)13(3-33)53-28)8-49-30(26(46)22(42)15(5-35)55-30)10-50-29(25(45)21(41)14(4-34)54-29)9-48-27(7-36)23(43)19(39)12(2-32)52-27/h11-26,31-46H,1-10H2/t11-,12-,13-,14-,15-,16-,17-,18-,19-,20-,21-,22-,23+,24+,25+,26+,27-,28-,29-,30-/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | OC[C@H]1O[C@@H]([C@H]([C@@H]1O)O)CO[C@]1(CO[C@]2(CO[C@]3(CO[C@]4(CO)O[C@@H]([C@H]([C@@H]4O)O)CO)O[C@@H]([C@H]([C@@H]3O)O)CO)O[C@@H]([C@H]([C@@H]2O)O)CO)O[C@@H]([C@H]([C@@H]1O)O)CO |
Number of atoms | 107 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 369658 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:14:04 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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