Molecule Type | sugar |
Residue Name (RNME) | G9HM |
Formula | C24H42O21 |
IUPAC InChI Key | PAPCZRNFXKRAAP-UOLDSAPJSA-N |
IUPAC InChI | InChI=1S/C24H42O21/c25-1-9-13(30)18(35)22(6-29,43-9)40-8-24(20(37)15(32)11(3-27)45-24)41-7-23(19(36)14(31)10(2-26)44-23)39-4-12-16(33)17(34)21(38,5-28)42-12/h9-20,25-38H,1-8H2/t9-,10-,11-,12-,13-,14-,15-,16-,17+,18+,19+,20+,21-,22-,23-,24-/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | OC[C@H]1O[C@]([C@H]([C@@H]1O)O)(OC[C@@]1(OC[C@H]2O[C@]([C@H]([C@@H]2O)O)(O)CO)O[C@@H]([C@H]([C@@H]1O)O)CO)CO[C@]1(CO)O[C@@H]([C@H]([C@@H]1O)O)CO |
Number of atoms | 87 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 369722 |
Visibility | Public |
Molecule Tags |
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No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:14:29 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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