Molecule Type | heteromolecule |
Residue Name (RNME) | U8S6 |
Formula | C28H44N12O13P |
IUPAC InChI Key | FWTPXKWPOMSHMQ-IEIBLJQLSA-N |
IUPAC InChI | InChI=1S/C28H45N12O13P/c1-10(29)24(45)36-12(3)26(47)38-13(4)27(48)37-11(2)25(46)32-6-16(41)39-17(22(31)44)14(5)53-54(49,50)51-7-15-19(42)20(43)28(52-15)40-9-35-18-21(30)33-8-34-23(18)40/h8-15,17,19-20,28,42-43H,6-7,29-30H2,1-5H3,(H2,31,44)(H,32,46)(H,36,45)(H,37,48)(H,38,47)(H,39,41)(H,49,50)/t10-,11-,12-,13-,14+,15+,17-,19+,20-,28+/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | O=C(N[C@@H]([C@H](O[P@@](=O)(OC[C@H]1O[C@H]([C@H]([C@@H]1O)O)N1C=[N]=C2C1=[N]=[CH]=[N]=C2N)O)C)C(=O)N)CNC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H]([NH3+])C)C)C)C |
Number of atoms | 98 |
Net Charge | -1 |
Forcefield | multiple |
Molecule ID | 701781 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:10:11 (hh:mm:ss) |
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