Molecule Type | heteromolecule |
Residue Name (RNME) | MK6Z |
Formula | C12H19N4O7P2S |
IUPAC InChI Key | YFCMNOPTHGTXKL-UHFFFAOYSA-N |
IUPAC InChI | InChI=1S/C12H21N4O7P2S/c1-8-11(3-4-22-25(20,21)23-24(17,18)19)26-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,10H,3-4,6-7,13H2,1-2H3,(H,20,21)(H2,17,18,19) |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CC1=C(CCO[P@@](=O)(OP(=O)(O)O)O)SCN1C[C@@H]1C=[N]=[C](=[N]=C1N)C |
Number of atoms | 45 |
Net Charge | 1 |
Forcefield | multiple |
Molecule ID | 715788 |
ChEMBL ID | 1236376 |
PDB hetId | TPP |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 8:58:22 (hh:mm:ss) |
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