Molecule Type | heteromolecule |
Residue Name (RNME) | WII2 |
Formula | C40H64N2O23 |
IUPAC InChI Key | OXMMFVCZURDDKA-XONDGEKQSA-N |
IUPAC InChI | InChI=1S/C40H64N2O23/c1-2-3-4-5-6-10-13-42(15-21(45)41-17-11-8-7-9-12-17)34(52)31-28(22(46)19(44)16-59-31)61-39-26(50)25(49)30(33(64-39)37(57)58)63-40-27(51)24(48)29(32(65-40)36(55)56)62-38-23(47)18(43)14-20(60-38)35(53)54/h17-20,22-33,38-40,43-44,46-51H,2-16H2,1H3,(H,41,45)(H,53,54)(H,55,56)(H,57,58)/t18-,19-,20+,22-,23-,24-,25+,26-,27+,28+,29+,30-,31+,32+,33+,38-,39+,40-/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCCCCCCCN(C(=O)[C@H]1OC[C@H]([C@H]([C@@H]1O[C@H]1O[C@H](C(=O)O)[C@@H]([C@H]([C@H]1O)O)O[C@@H]1O[C@H](C(=O)O)[C@H]([C@@H]([C@@H]1O)O)O[C@H]1O[C@@H](C[C@H]([C@H]1O)O)C(=O)O)O)O)CC(=O)NC1CCCCC1 |
Number of atoms | 129 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 853328 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:15:04 (hh:mm:ss) |
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