Molecule Type | heteromolecule |
Residue Name (RNME) | NSMF |
Formula | C34H56N2O17 |
IUPAC InChI Key | VCFJEMHGXOINFG-XCQZHHALSA-N |
IUPAC InChI | InChI=1S/C34H56N2O17/c1-2-3-4-5-6-10-13-36(15-21(39)35-17-11-8-7-9-12-17)30(44)28-26(22(40)19(38)16-49-28)51-34-25(43)24(42)27(29(53-34)32(47)48)52-33-23(41)18(37)14-20(50-33)31(45)46/h17-20,22-29,33-34,37-38,40-43H,2-16H2,1H3,(H,35,39)(H,45,46)(H,47,48)/t18-,19+,20-,22+,23-,24-,25+,26-,27+,28-,29-,33-,34-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCCCCCCCN(C(=O)[C@H]1OC[C@H]([C@H]([C@@H]1O[C@H]1O[C@H](C(=O)O)[C@@H]([C@H]([C@H]1O)O)O[C@@H]1O[C@@H](C[C@@H]([C@@H]1O)O)C(=O)O)O)O)CC(=O)NC1CCCCC1 |
Number of atoms | 109 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 853338 |
Visibility | Public |
Molecule Tags |
Generating ...
Generating ...
Generating ...
No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.
Click table to toggle details.
Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:03:59 (hh:mm:ss) |
Access to this feature is currently restricted
The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
Access to this feature is currently restricted