| Molecule Type | heteromolecule |
| Residue Name (RNME) | NIA |
| Formula | C8H11N4O9P |
| IUPAC InChI Key | ICVOUJFIZKGOCA-KIGFOHEYSA-N |
| IUPAC InChI | InChI=1S/C8H14N4O9P/c9-6-7(12(15)16)10-2-11(6)8-5(14)4(13)3(21-8)1-20-22(17,18)19/h2-6,8,13-14H,1,9H2,(H2,17,18,19)/t3-,4-,5-,6?,8-/m1/s1 |
| IUPAC Name | |
| Common Name | |
| Canonical SMILES (Daylight) | O[C@@H]1[C@H](O)[C@H](O[C@H]1N1C=[N]=C([C@@H]1N)N(=O)=O)CO[P@@](=[O-])(O)[O-] |
| Number of atoms | 33 |
| Net Charge | -2 |
| Forcefield | multiple |
| Molecule ID | 12241 |
| PDB hetId | NIA |
| Visibility | Public |
| Molecule Tags |
Generating ...
Generating ...
Generating ...
No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.
Click table to toggle details.
| Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
|---|---|---|---|---|---|
| Calculation | None | Energy Minization | Energy Minization | Hessian | |
| Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
| Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
| Content of MD Topology | |||||
| Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
| Geometry | User Provided | Optimized | Optimized | Optimized | |
| Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
| Angles | |||||
| Dihedrals | |||||
| Current Processing State | Completed |
| Total Processing Time | 2 days, 11:15:34 (hh:mm:ss) |
Access to this feature is currently restricted