Molecule Type | heteromolecule |
Residue Name (RNME) | IU8E |
Formula | C49H79N14O16 |
IUPAC InChI Key | MZHOJMFKEDPSEH-POFDKVPJSA-N |
IUPAC InChI | InChI=1S/C49H79N14O16/c1-2-3-4-5-6-7-8-12-41(70)56-26-42(71)57-33(23-38(53)67)46(75)63-34(24-39(54)68)47(76)59-29(17-19-36(51)65)43(72)58-30(18-20-37(52)66)44(73)62-35(25-40(55)69)48(77)61-32(22-27-13-15-28(64)16-14-27)45(74)60-31(49(78)79)11-9-10-21-50/h13-16,29-35,64H,2-12,17-26H2,1,50H3,(H2,51,65)(H2,52,66)(H2,53,67)(H2,54,68)(H2,55,69)(H,56,70)(H,57,71)(H,58,72)(H,59,76)(H,60,74)(H,61,77)(H,62,73)(H,63,75)(H,78,79)/t29-,30-,31-,32-,33-,34-,35-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCCCCCCCCC(=O)NCC(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)O)CCCC[NH3])Cc1ccc(cc1)O)CC(=O)N)CCC(=O)N)CCC(=O)N)CC(=O)N)CC(=O)N |
Number of atoms | 158 |
Net Charge | 1 |
Forcefield | multiple |
Molecule ID | 1273212 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:15:21 (hh:mm:ss) |
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