C16H17ClN5O2 | MD Topology | NMR | X-Ray

Visualize with JSmol

Molecule Information

Molecule Typeheteromolecule
Residue Name (RNME)9QIV
FormulaC16H17ClN5O2
IUPAC InChI Key
MFUSKGPTNSXMQM-UHFFFAOYSA-N
IUPAC InChI
InChI=1S/C16H19ClN5O2/c1-3-8-21-14-11(15(23)22(9-4-2)16(21)24)19-13(20-14)10-6-5-7-18-12(10)17/h5-7,14,20H,3-4,8-9H2,1-2H3
IUPAC Name
Common Name
Canonical SMILES (Daylight)
CCCN1C(=O)N(CCC)C(=O)C2=[N]=C(N[C@@H]12)c1cccnc1Cl
Number of atoms41
Net Charge-1
Forcefieldmultiple
Molecule ID1402187
ChEMBL ID 90037
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

Generating ...

X-Ray - Docking Files

Generating ...

NMR Parameters

1H NMR Spectrum

Generating ...

Fragment-Based Charges

No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.

Topology History

Processing Information

QM Processing Stage

Click table to toggle details.

Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 2000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

Angles
Dihedrals

Data

Current Processing StateCompleted
Total Processing Time1:48:03 (hh:mm:ss)

Calculated Solvation Free Energy

Access to this feature is currently restricted

Submit New Solvation Free Energy Computation