Molecule Type | heteromolecule |
Residue Name (RNME) | 1GKP |
Formula | C46H135NO25Si21 |
IUPAC InChI Key | OTIRIFHUZVDDRY-OMFLTLASSA-N |
IUPAC InChI | InChI=1S/C46H136NO25Si21/c1-73(2,50)53-75(5,6)55-77(9,10)56-78(11,12)57-79(13,14)58-80(15,16)59-81(17,18)60-82(19,20)61-83(21,22)62-84(23,24)63-85(25,26)64-86(27,28)65-87(29,30)66-88(31,32)67-89(33,34)68-90(35,36)69-91(37,38)70-92(39,40)72-93(52,45-41-43-47-44-42-46(48)49)71-76(7,8)54-74(3,4)51/h50-52H,41-45,47H2,1-40H3,(H,48,49)/t93-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | [O-]C(=O)CC[NH2+]CCC[Si@](O[Si](O[Si](O)(C)C)(C)C)(O[Si](O[Si](O[Si](O[Si](O[Si](O[Si](O[Si](O[Si](O[Si](O[Si](O[Si](O[Si](O[Si](O[Si](O[Si](O[Si](O[Si](O[Si](O)(C)C)(C)C)(C)C)(C)C)(C)C)(C)C)(C)C)(C)C)(C)C)(C)C)(C)C)(C)C)(C)C)(C)C)(C)C)(C)C)(C)C)(C)C)O |
Number of atoms | 228 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 1640281 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 1:12:20 (hh:mm:ss) |
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