4-Methylphenol | C7H8O | MD Topology | NMR | X-Ray

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Molecule Information

Molecule Typeheteromolecule
Residue Name (RNME)_I0H
FormulaC7H8O
IUPAC InChI Key
IWDCLRJOBJJRNH-UHFFFAOYSA-N
IUPAC InChI
InChI=1S/C7H8O/c1-6-2-4-7(8)5-3-6/h2-5,8H,1H3
IUPAC Name
4-Methylphenol
Common Name4-Methylphenol
Canonical SMILES (Daylight)
Cc1ccc(cc1)O
Number of atoms16
Net Charge0
Forcefieldmultiple
Molecule ID17
Tautomer Group IDNone
ChemSpider ID13839082
ChEMBL ID 16645
PDB hetId PCR
Visibility Public
Molecule Tags ATB3.0 validation Boulanger et al. Dodda et al. Gerber Marenich et al. Mobley et al. phenol phenyl Shivakumar et al.

Format

Molecular Dynamics (MD) Files

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X-Ray - Docking Files

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NMR Parameters

1H NMR Spectrum

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Fragment-Based Charges

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Topology History

Processing Information

QM Processing Stage

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Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 2000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

Angles
Dihedrals

Data

Current Processing StateCompleted
Total Processing Time10 days, 14:29:17 (hh:mm:ss)

Similar compounds (1-2 of 2)

Molid  Formula  Iupac  Atoms  Charge  Curation 
612143 C7H7O 4-Methylphenol 15 -1 ATB
4274 C7H7O 4-Methylphenol 15 -1 ATB
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ATB Pipeline Setting

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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.

Experimental Solvation Free Energies (1-15 of 15)

Calculated Solvation Free Energy

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Solvation Free Energy Data

Status Completed
TI Solvent ATB3.0 hexane
Result -22.7 +/- 1.4 kJ.mol-1
Experimental Solvent hexane
Experimental Value -24.5 +/- 0.8 kJ.mol-1
ATB Version 3.0
Completion Date 2018-10-12

Solvation Free Energy Plot

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Calculated Solvation Free Energy

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Solvation Free Energy Data

Status Completed
TI Solvent SPC water
Result -25.6 +/- 1.5 kJ.mol-1
Experimental Solvent water
Experimental Value -25.7 +/- NA kJ.mol-1
ATB Version 3.0
Completion Date 2018-10-12

Solvation Free Energy Plot

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Calculated Solvation Free Energy

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Column Lengths: [4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4] Column Lengths: [4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4] Column Lengths: [4, 4, 4, 4] Column Lengths: [3, 3, 3, 3] Column Lengths: [3, 3, 3]