C16H24NO3 | MD Topology | NMR | X-Ray

Visualize with JSmol

Show Structure

Molecule Information
Molecule Typeheteromolecule
Residue Name (RNME)7OL3
FormulaC16H24NO3
IUPAC InChI Key
OBCAFAZBQWZERG-ZDUSSCGKSA-N
IUPAC InChI
InChI=1S/C16H24NO3/c1-12-10-14(20-2)5-6-15(12)16(19)13-4-3-7-17(11-13)8-9-18/h5-6,10,13,17-18H,3-4,7-9,11H2,1-2H3/t13-/m0/s1
IUPAC Name
Common Name
Canonical SMILES (Daylight)
OCC[NH]1CCC[C@@H](C1)C(=O)c1ccc(cc1C)OC
Number of atoms44
Net Charge1
Forcefieldmultiple
Molecule ID1727412
ChEMBL ID 1497917
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

Generating ...

X-Ray - Docking Files

Generating ...

NMR Parameters

1H NMR Spectrum

Generating ...

Fragment-Based Charges

No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.

Topology History

Processing Information

QM Processing Stage

Click table to toggle details.

Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 2000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

 Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.
Angles
Dihedrals

Data

Current Processing StateCompleted
Total Processing Time2:14:17 (hh:mm:ss)

ATB Pipeline Setting

Calculated Solvation Free Energy

Access to this feature is currently restricted

Submit New Solvation Free Energy Computation

Conditions of Use