Molecule Type | heteromolecule |
Residue Name (RNME) | IBUH |
Formula | C88H98F4N8O2S5 |
IUPAC InChI Key | PLPVLINVZSWYNB-ROEWGLDMSA-N |
IUPAC InChI | InChI=1S/C88H98F4N8O2S5/c1-9-17-23-25-29-35-53(33-27-19-11-3)37-61-69(43-63-71(55(45-93)46-94)57-39-65(89)67(91)41-59(57)81(63)101)103-87-79-85(105-83(61)87)73-75-76(98-107-97-75)74-78(77(73)99(79)49-51(15-7)31-21-13-5)100(50-52(16-8)32-22-14-6)80-86(74)106-84-62(38-54(34-28-20-12-4)36-30-26-24-18-10-2)70(104-88(80)84)44-64-72(56(47-95)48-96)58-40-66(90)68(92)42-60(58)82(64)102/h39-44,51-54H,9-38,49-50H2,1-8H3/b63-43-,64-44-/t51-,52+,53-,54-/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCCCCCC[C@H](Cc1c(/C=C\2/C(=C(C#N)C#N)c3c(C2=O)cc(c(c3)F)F)sc2c1sc1c2n(c2c1c1nsnc1c1c2n(C[C@@H](CCCC)CC)c2c1sc1c2sc(c1C[C@@H](CCCCCCC)CCCCC)/C=C\1/C(=C(C#N)C#N)c2c(C1=O)cc(c(c2)F)F)C[C@H](CCCC)CC)CCCCC |
Number of atoms | 205 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 1748880 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:39:42 (hh:mm:ss) |
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