| Molecule Type | heteromolecule |
| Residue Name (RNME) | NJEX |
| Formula | H40O76Si28 |
| IUPAC InChI Key | JIOPWPQTOOPYQQ-HMFVRISTSA-N |
| IUPAC InChI | InChI=1S/H40O76Si28/c1-77(2)41-80(7,8)51-94(33)58-91(29,30)59-96(35)64-95(34)54-86(19,20)47-90(27,28)62-104-74-99(38)56-85(17,18)46-84(15,16)53-93(32)52-83(13,14)45-82(11,12)50-92(31)49-79(5,6)43-78(3,4)44-88(23,24)60-102(70-93,75-104)73-98(37,67-101(40,66-96)69-100(39,63-92)68-99)57-87(21,22)48-89(25,26)61-103(71-94,76-104)72-97(36,65-95)55-81(9,10)42-77/h1-40H/t92-,93+,94+,95+,96+,97-,98+,99+,100-,101-,102-,103-,104-/m0/s1 |
| IUPAC Name | |
| Common Name | |
| Canonical SMILES (Daylight) | O[Si@@]12O[Si@]34O[Si@@]56O[Si@]7(O)O[Si](O)(O)O[Si](O[Si](O[Si@@](O5)(O)O[Si@](O[Si](O[Si](O4)(O)O)(O)O)(O[Si@@](O[Si@@]4(O[Si@@](O2)(O)O[Si@@]2(O)O[Si](O)(O)O[Si](O[Si](O[Si@@](O3)(O[Si@](O4)(O)O[Si](O[Si](O6)(O)O)(O)O)O[Si@](O[Si](O[Si](O1)(O)O)(O)O)(O)O[Si](O[Si](O2)(O)O)(O)O)(O)O)(O)O)O)(O)O[Si](O7)(O)O)O)(O)O)(O)O |
| Number of atoms | 144 |
| Net Charge | 0 |
| Forcefield | multiple |
| Molecule ID | 1769364 |
| Visibility | Public |
| Molecule Tags |
Generating ...
Generating ...
Generating ...
No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.
Click table to toggle details.
| Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
|---|---|---|---|---|---|
| Calculation | None | Energy Minization | Energy Minization | Hessian | |
| Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
| Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
| Content of MD Topology | |||||
| Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
| Geometry | User Provided | Optimized | Optimized | Optimized | |
| Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
| Angles | |||||
| Dihedrals | |||||
| Current Processing State | Completed |
| Total Processing Time | 0:30:01 (hh:mm:ss) |
Access to this feature is currently restricted