| Molecule Type | heteromolecule |
| Residue Name (RNME) | RWMC |
| Formula | C66H112O53S6 |
| IUPAC InChI Key | VBJYPIAITAVCSV-JSYJVNEISA-N |
| IUPAC InChI | InChI=1S/C66H130O53S6/c67-25-32-51-39(71)43(75)60(106-32)115-52-36(29-100-13-1-7-19-120(82,83)84)110-62(45(77)41(52)73)118-55-35(28-70)109-65(48(80)58(55)104-17-5-11-23-124(94,95)96)116-53-37(30-101-14-2-8-20-121(85,86)87)111-63(46(78)42(53)74)117-54-34(27-69)108-64(47(79)57(54)103-16-4-10-22-123(91,92)93)113-50-33(26-68)107-61(44(76)40(50)72)119-56-38(31-102-15-3-9-21-122(88,89)90)112-66(114-51)49(81)59(56)105-18-6-12-24-125(97,98)99/h32-99H,1-31H2/t32-,33-,34+,35-,36-,37-,38-,39-,40-,41+,42+,43-,44+,45+,46-,47-,48-,49-,50+,51-,52+,53+,54+,55-,56+,57-,58-,59+,60-,61-,62+,63+,64-,65+,66-/m0/s1 |
| IUPAC Name | |
| Common Name | |
| Canonical SMILES (Daylight) | OC[C@@H]1O[C@@H]2O[C@@H]3[C@H](COCCCCS(O)(O)[O-])O[C@@H]([C@H]([C@H]3O)O)O[C@@H]3[C@@H](CO)O[C@H]([C@H]([C@@H]3OCCCCS(O)(O)[O-])O)O[C@@H]3[C@H](CO)O[C@H]([C@@H]([C@@H]3O)O)O[C@@H]3[C@@H](O[C@@H](O[C@H]4[C@@H](O[C@@H](O[C@@H]5[C@@H](O[C@H](O[C@@H]1[C@H]([C@@H]2O)OCCCCS(O)(O)[O-])[C@H](O)[C@H]5O)COCCCCS(O)(O)[O-])[C@@H](O)[C@@H]4O)CO)[C@@H](O)[C@H]3OCCCCS(O)(O)[O-])COCCCCS(O)(O)[O-] |
| Number of atoms | 237 |
| Net Charge | -6 |
| Forcefield | multiple |
| Molecule ID | 2051313 |
| Visibility | Public |
| Molecule Tags |
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| Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
|---|---|---|---|---|---|
| Calculation | None | Energy Minization | Energy Minization | Hessian | |
| Level of Theory | None | Semi-Empirical / SCF | DFT (ωB97X/6-31G*) | DFT (ωB97X/6-31G*) | |
| Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
| Content of MD Topology | |||||
| Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
| Geometry | User Provided | Optimized | Optimized | Optimized | |
| Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
| Angles | |||||
| Dihedrals | |||||
| Current Processing State | Completed |
| Total Processing Time | 1:15:22 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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