Molecule Type | heteromolecule |
Residue Name (RNME) | YB51 |
Formula | C68H124O12 |
IUPAC InChI Key | QXIYKZGWDYDOFI-ODOCMKQTSA-N |
IUPAC InChI | InChI=1S/C68H124O12/c1-4-7-10-13-16-19-22-25-28-31-34-37-40-43-46-49-64(70)76-55-54-73-60-62(74-53-52-69)68-67(79-59-58-78-66(72)51-48-45-42-39-36-33-30-27-24-21-18-15-12-9-6-3)63(61-80-68)75-56-57-77-65(71)50-47-44-41-38-35-32-29-26-23-20-17-14-11-8-5-2/h25-30,62-63,67-69H,4-24,31-61H2,1-3H3/b28-25+,29-26-,30-27+/t62-,63+,67-,68+/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCCCCCCC/C=C/CCCCCCCC(=O)OCCO[C@@H]1[C@@H](OCCOC(=O)CCCCCCC/C=C\CCCCCCCC)CO[C@H]1[C@@H](COCCOC(=O)CCCCCCC/C=C/CCCCCCCC)OCCO |
Number of atoms | 204 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 300987 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 1:08:10 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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