Molecule Type | heteromolecule |
Residue Name (RNME) | SQUZ |
Formula | C96H113NO2S3 |
IUPAC InChI Key | CODAUGQRXKXHFL-ZHYUKXKVSA-N |
IUPAC InChI | InChI=1S/C96H113NO2S3/c1-12-13-16-59-39-73-66-22-18-48(2)30-70(66)60(19-20-61-45-100-46-82-65(61)24-25-68-72(82)32-50(4)64-17-14-15-49(3)87(64)68)40-78(73)90-51(5)31-63(42-71(59)90)98-44-62-41-74-76-36-56(10)96-81(38-57(11)102-96)91(76)53(7)34-77(74)92-55(9)37-86-94(93(62)92)83(47-101-86)85-43-80-84(99-85)27-26-69-88-54(8)35-79-67(75(88)33-52(6)89(69)80)23-21-58-28-29-97-95(58)79/h21,23,26-29,33-38,41,43,47-51,59-61,63-66,68,70-73,78,80,82,84,87,90,97H,12-20,22,24-25,30-32,39-40,42,44-46H2,1-11H3/t48-,49-,50+,51+,59-,60-,61-,63+,64-,65-,66+,68-,70-,71-,72-,73-,78+,80+,82-,84+,87+,90-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCCC[C@H]1C[C@@H]2[C@H]([C@@H]3[C@H]1C[C@H](OCc1cc4c(c5c1c1c(scc1C1=C[C@@H]6[C@H](O1)C=Cc1c6c(C)cc6c1c(C)cc1c6ccc6c1[nH]cc6)cc5C)cc(c1c4cc(C)c4c1cc(s4)C)C)C[C@H]3C)C[C@@H]([C@H]1[C@H]2CC[C@@H](C1)C)CC[C@H]1CSC[C@H]2[C@H]1CC[C@H]1[C@@H]2C[C@H]([C@H]2[C@H]1[C@@H](C)CCC2)C |
Number of atoms | 215 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 34516 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:52:03 (hh:mm:ss) |
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