Molecule Type | heteromolecule |
Residue Name (RNME) | DVHY |
Formula | C45H56N6O5S |
IUPAC InChI Key | HHBKRDSXDGFYEF-RHEUJEOPSA-N |
IUPAC InChI | InChI=1S/C45H57N6O5S/c46-29-43(52)47-31-44(53)50-42(32-57)45(54)51-48-30-37-27-35-8-1-3-24-55-40-20-16-33(17-21-40)10-5-12-38-14-7-15-39(49-38)13-6-11-34-18-22-41(23-19-34)56-25-4-2-9-36(26-35)28-37/h7,14,16-23,26-28,30,42,57H,1-6,8-13,15,24-25,29,31-32,46H2,(H,47,52)(H,50,53)(H,51,54)/b48-30-/t42-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | NCC(=O)NCC(=O)N[C@H](C(=O)N/N=C\c1cc2CCCCOc3ccc(cc3)CCCC3=[N]=C(CCCc4ccc(OCCCCc(c1)c2)cc4)C=CC3)CS |
Number of atoms | 113 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 354265 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:15:45 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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