Molecule Type | heteromolecule |
Residue Name (RNME) | _OBS |
Formula | C18H37N5O8 |
IUPAC InChI Key | JJCQSGDBDPYCEO-KVFITPCBSA-N |
IUPAC InChI | InChI=1S/C18H37N5O8/c19-4-6-1-2-7(20)17(28-6)30-15-8(21)3-9(22)16(14(15)27)31-18-13(26)11(23)12(25)10(5-24)29-18/h6-18,24-27H,1-5,19-23H2/t6-,7-,8+,9-,10+,11-,12-,13-,14+,15+,16-,17+,18-/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | NC[C@H]1CC[C@H]([C@@H](O1)O[C@H]1[C@@H](N)C[C@H]([C@H]([C@H]1O)O[C@H]1O[C@@H](CO)[C@H]([C@H]([C@H]1O)N)O)N)N |
Number of atoms | 68 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 8200 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 1:24:33 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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