Molecule Type | heteromolecule |
Residue Name (RNME) | D74V |
Formula | C6H13NO5 |
IUPAC InChI Key | MSWZFWKMSRAUBD-DVKNGEFBSA-N |
IUPAC InChI | InChI=1S/C6H13NO5/c7-3-5(10)4(9)2(1-8)12-6(3)11/h2-6,8-11H,1,7H2/t2-,3-,4+,5-,6+/m1/s1 |
IUPAC Name | (2S,3R,4R,5R,6R)-3-amino-6-(hydroxymethyl)oxane-2,4,5-triol |
Common Name | 2-Amino-2-deoxy-alpha-D-galactopyranose |
Canonical SMILES (Daylight) | OC[C@H]1O[C@H](O)[C@@H]([C@H]([C@H]1O)O)N |
Number of atoms | 25 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 95759 |
ChemSpider ID | 4476310 |
ChEMBL ID | 3304228 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 7:13:35 (hh:mm:ss) |
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